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annotate scripts/migration/migrate_datasets.sql @ 12:c2e2d794847f

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new: add config.properties file for gazetteer
author Zoe Hong <zhong@mpiwg-berlin.mpg.de>
date Wed, 30 Sep 2015 13:43:54 +0200
parents a50cf11e5178
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
10
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
1 --copy studyversion fields to datasetversion
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
2 update datasetversion
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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3 set createtime = sv.createtime,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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4 lastupdatetime = sv.lastupdatetime,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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5 archivetime= sv.archivetime,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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6 archivenote = sv.archivenote,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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7 deaccessionlink = sv.deaccessionlink,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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8 versionnote = sv.versionnote
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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9 from _dvn3_studyversion sv, dataset d, _dvn3_study s
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
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10 where d.authority = s.authority
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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11 and d.protocol = s.protocol
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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12 and d.identifier = s.studyid
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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13 and datasetversion.dataset_id = d.id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
14 and datasetversion.versionnumber = sv.versionnumber
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
15 and sv.study_id = s.id;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
16
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
17 -- set dataset.publication date to the releasetime of the earliest released studyversion
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
18 update dvobject
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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19 set publicationdate = m.releasetime
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
20 from (select dvobject.id, sv.study_id, min(sv.releasetime) as releasetime
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
21 from _dvn3_studyversion sv, dataset d, _dvn3_study s, dvobject
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
22 where d.authority = s.authority
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
23 and d.protocol = s.protocol
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
24 and d.identifier = s.studyid
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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25 and dvobject.id = d.id
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Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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26 and sv.study_id = s.id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
27 and sv.versionstate!='DRAFT' group by sv.study_id, dvobject.id) m where m.id = dvobject.id;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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28
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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29 -- set dvobject creator_id for each dataset to study.creator_id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
30 update dvobject
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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31 set creator_id = s.creator_id, createdate = s.createtime
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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32 from _dvn3_study s, dataset d
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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33 where d.authority = s.authority
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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34 and d.protocol = s.protocol
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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35 and d.identifier = s.studyid
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Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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36 and dvobject.id = d.id;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
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37
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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38 -- migrate data from _dvn3_versioncontributor to datasetversionuser
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
39 insert into datasetversionuser ( lastupdatedate, authenticateduser_id, datasetversion_id ) (
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
40 select vc.lastupdatetime, vc.contributor_id, dv.id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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41 from _dvn3_versioncontributor vc,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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42 _dvn3_studyversion sv,
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Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
43 _dvn3_study s,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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44 dataset d,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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45 datasetversion dv,
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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46 authenticateduser au
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
47 where vc.studyversion_id = sv.id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
48 and sv.study_id = s.id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
49 and d.authority = s.authority
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
50 and d.protocol = s.protocol
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
51 and d.identifier = s.studyid
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
52 and dv.dataset_id = d.id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
53 and dv.versionnumber = sv.versionnumber
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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54 and au.id = vc.contributor_id);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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55
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
56 -- modify versionstate for older versions of deaccessioned studies
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
57 update datasetversion
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
58 set versionstate = 'DEACCESSIONED'
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
59 where id in (
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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60 select dv1.id from datasetversion dv1, datasetversion dv2
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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61 where dv1.dataset_id = dv2.dataset_id
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
62 and dv1.versionnumber < dv2.versionnumber
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
63 and dv2.versionstate = 'DEACCESSIONED');
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
64
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
65 -- update the globalidcreatetime to be equal to the publicationdate
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
66 update dataset set globalidcreatetime = publicationdate
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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67 from dvobject dvo
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Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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68 where dataset.id = dvo.id;
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Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
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69