annotate scripts/migration/versions_source_step2_ @ 14:be7787c36e58 default tip

new: nofity LGSercies for deleted files
author Zoe Hong <zhong@mpiwg-berlin.mpg.de>
date Mon, 02 Nov 2015 16:41:23 +0100
parents a50cf11e5178
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
10
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
1 #!/usr/bin/perl
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
2
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
3
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
4 unless ( -d "/tmp/ddi" )
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
5 {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
6 mkdir "/tmp/ddi";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
7 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
8
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
9 while (<>)
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
10 {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
11 chop;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
12 @_ = split ("\t");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
13 $alias = $_[0];
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
14 $studyid = $_[1];
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
15 $ddifile = $_[2];
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
16
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
17 $ddifile = "/nfs/iqss/DVN/data/" . $ddifile;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
18
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
19 if ( -f $ddifile )
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
20 {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
21 $total += (stat($study))[7];
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
22 $tmpdir = "/tmp/ddi/" . $alias;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
23 unless ( -d $tmpdir )
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
24 {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
25 mkdir $tmpdir;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
26 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
27
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
28 $tmpfile = $tmpdir . "/" . $studyid . "\.xml";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
29 system "cp $ddifile $tmpfile";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
30
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
31 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
32 else
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
33 {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
34 print STDERR "warning: missing ddi file! (" . $ddifile . ")\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
35 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
36 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
37
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
38 print "Total of " . $total . " bytes copied.\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
39
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
Zoe Hong <zhong@mpiwg-berlin.mpg.de>
parents:
diff changeset
40