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annotate scripts/vagrant/setup.sh @ 10:a50cf11e5178

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Rewrite LGDataverse completely upgrading to dataverse4.0
author Zoe Hong <zhong@mpiwg-berlin.mpg.de>
date Tue, 08 Sep 2015 17:00:21 +0200
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a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0
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1 #!/bin/bash
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2 echo "Installing dependencies for Dataverse"
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3
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4 # Add JQ
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5 echo "Installing jq for the setup scripts"
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6 wget http://stedolan.github.io/jq/download/linux64/jq
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7 chmod +x jq
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8 # this is where EPEL puts it
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9 sudo mv jq /usr/bin/jq
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10
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11 echo "Adding Shibboleth yum repo"
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12 cp /dataverse/conf/vagrant/etc/yum.repos.d/shibboleth.repo /etc/yum.repos.d
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13 cp /dataverse/conf/vagrant/etc/yum.repos.d/epel-apache-maven.repo /etc/yum.repos.d
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14 yum install -y java-1.7.0-openjdk-devel postgresql-server apache-maven httpd mod_ssl shibboleth shibboleth-embedded-ds
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15 service postgresql initdb
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16 service postgresql stop
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17 cp /dataverse/conf/vagrant/var/lib/pgsql/data/pg_hba.conf /var/lib/pgsql/data/pg_hba.conf
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18 service postgresql start
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19 chkconfig postgresql on
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20 GLASSFISH_USER=glassfish
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21 echo "Ensuring Unix user '$GLASSFISH_USER' exists"
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22 useradd $GLASSFISH_USER || :
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23 DOWNLOAD_DIR='/dataverse/downloads'
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24 GLASSFISH_ZIP="$DOWNLOAD_DIR/glassfish-4.1.zip"
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25 SOLR_TGZ="$DOWNLOAD_DIR/solr-4.6.0.tgz"
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26 WELD_PATCH="$DOWNLOAD_DIR/weld-osgi-bundle-2.2.10.Final-glassfish4.jar"
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27 if [ ! -f $GLASSFISH_ZIP ] || [ ! -f $SOLR_TGZ ]; then
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28 echo "Couldn't find $GLASSFISH_ZIP or $SOLR_TGZ! Running download script...."
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29 cd $DOWNLOAD_DIR && ./download.sh && cd
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30 echo "Done running download script."
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31 fi
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32 GLASSFISH_USER_HOME=~glassfish
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33 GLASSFISH_ROOT=$GLASSFISH_USER_HOME/glassfish4
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34 if [ ! -d $GLASSFISH_ROOT ]; then
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35 echo "Copying $GLASSFISH_ZIP to $GLASSFISH_USER_HOME and unzipping"
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36 su $GLASSFISH_USER -s /bin/sh -c "cp $GLASSFISH_ZIP $GLASSFISH_USER_HOME"
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37 su $GLASSFISH_USER -s /bin/sh -c "cd $GLASSFISH_USER_HOME && unzip -q $GLASSFISH_ZIP"
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38 su $GLASSFISH_USER -s /bin/sh -c "mv $GLASSFISH_ROOT/glassfish/modules/weld-osgi-bundle.jar /tmp"
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39 su $GLASSFISH_USER -s /bin/sh -c "cp $WELD_PATCH $GLASSFISH_ROOT/glassfish/modules"
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40 else
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41 echo "$GLASSFISH_ROOT already exists"
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42 fi
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43 service shibd start
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44 service httpd stop
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45 cp /dataverse/conf/httpd/conf.d/dataverse.conf /etc/httpd/conf.d/dataverse.conf
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46 service httpd start
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47 curl -k --sslv3 https://pdurbin.pagekite.me/Shibboleth.sso/Metadata > /tmp/pdurbin.pagekite.me
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48 cp -a /etc/shibboleth/shibboleth2.xml /etc/shibboleth/shibboleth2.xml.orig
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49 cp -a /etc/shibboleth/attribute-map.xml /etc/shibboleth/attribute-map.xml.orig
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50 # need more attributes, such as sn, givenName, mail
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51 cp /dataverse/conf/vagrant/etc/shibboleth/attribute-map.xml /etc/shibboleth/attribute-map.xml
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52 # FIXME: automate this?
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53 #curl 'https://www.testshib.org/cgi-bin/sp2config.cgi?dist=Others&hostname=pdurbin.pagekite.me' > /etc/shibboleth/shibboleth2.xml
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54 #cp /dataverse/conf/vagrant/etc/shibboleth/shibboleth2.xml /etc/shibboleth/shibboleth2.xml
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55 #service shibd restart
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56 #curl -k --sslv3 https://pdurbin.pagekite.me/Shibboleth.sso/Metadata > /downloads/pdurbin.pagekite.me
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57 #service httpd restart