LGDataverses: src/main/java/edu/harvard/iq/dataverse/DatasetServiceBean.java annotate

author	Zoe Hong <zhong@mpiwg-berlin.mpg.de>
date	Tue, 08 Sep 2015 17:00:21 +0200
parents
children

rev	line source
10 a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	1 /*
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	2 * To change this license header, choose License Headers in Project Properties.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	3 * To change this template file, choose Tools \| Templates
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	4 * and open the template in the editor.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	5 */
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	6 package edu.harvard.iq.dataverse;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	7
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	8 import edu.harvard.iq.dataverse.authorization.AuthenticationServiceBean;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	9 import edu.harvard.iq.dataverse.authorization.users.AuthenticatedUser;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	10 import edu.harvard.iq.dataverse.authorization.users.User;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	11 import edu.harvard.iq.dataverse.dataaccess.ImageThumbConverter;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	12 import edu.harvard.iq.dataverse.settings.SettingsServiceBean;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	13 import java.io.ByteArrayOutputStream;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	14 import java.io.OutputStream;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	15 import java.text.SimpleDateFormat;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	16 import java.util.ArrayList;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	17 import java.util.Date;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	18 import java.util.List;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	19 import java.util.logging.Level;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	20 import java.util.logging.Logger;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	21 import javax.ejb.EJB;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	22 import javax.ejb.EJBException;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	23 import javax.ejb.Stateless;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	24 import javax.ejb.TransactionAttribute;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	25 import javax.ejb.TransactionAttributeType;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	26 import javax.inject.Named;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	27 import javax.persistence.EntityManager;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	28 import javax.persistence.PersistenceContext;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	29 import javax.persistence.Query;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	30 import javax.persistence.TypedQuery;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	31 import javax.xml.stream.XMLOutputFactory;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	32 import javax.xml.stream.XMLStreamException;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	33 import javax.xml.stream.XMLStreamWriter;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	34 import org.apache.commons.lang.RandomStringUtils;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	35
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	36 /**
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	37 *
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	38 * @author skraffmiller
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	39 */
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	40 @Stateless
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	41 @Named
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	42 public class DatasetServiceBean implements java.io.Serializable {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	43
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	44 private static final Logger logger = Logger.getLogger(DatasetServiceBean.class.getCanonicalName());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	45 @EJB
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	46 IndexServiceBean indexService;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	47
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	48 @EJB
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	49 DOIEZIdServiceBean doiEZIdServiceBean;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	50
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	51 @EJB
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	52 SettingsServiceBean settingsService;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	53
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	54 @EJB
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	55 DatasetVersionServiceBean versionService;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	56
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	57 @EJB
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	58 AuthenticationServiceBean authentication;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	59
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	60 @EJB
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	61 DataFileServiceBean fileService;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	62
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	63 @PersistenceContext(unitName = "VDCNet-ejbPU")
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	64 private EntityManager em;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	65
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	66 public Dataset find(Object pk) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	67 return em.find(Dataset.class, pk);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	68 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	69
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	70 public List<Dataset> findByOwnerId(Long ownerId) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	71 return findByOwnerId(ownerId, false);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	72 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	73
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	74 public List<Dataset> findPublishedByOwnerId(Long ownerId) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	75 return findByOwnerId(ownerId, true);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	76 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	77
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	78 private List<Dataset> findByOwnerId(Long ownerId, boolean onlyPublished) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	79 List<Dataset> retList = new ArrayList();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	80 TypedQuery<Dataset> query = em.createQuery("select object(o) from Dataset as o where o.owner.id =:ownerId order by o.id", Dataset.class);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	81 query.setParameter("ownerId", ownerId);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	82 if (!onlyPublished) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	83 return query.getResultList();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	84 } else {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	85 for (Dataset ds : query.getResultList()) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	86 if (ds.isReleased() && !ds.isDeaccessioned()) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	87 retList.add(ds);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	88 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	89 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	90 return retList;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	91 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	92 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	93
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	94 public List<Dataset> findAll() {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	95 return em.createQuery("select object(o) from Dataset as o order by o.id").getResultList();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	96 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	97
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	98 /**
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	99 * For docs, see the equivalent method on the DataverseServiceBean.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	100 * @see DataverseServiceBean#findAllOrSubset(long, long)
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	101 */
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	102 public List<Dataset> findAllOrSubset(long numPartitions, long partitionId, boolean skipIndexed) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	103 if (numPartitions < 1) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	104 long saneNumPartitions = 1;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	105 numPartitions = saneNumPartitions;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	106 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	107 String skipClause = skipIndexed ? "AND o.indexTime is null " : "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	108 TypedQuery<Dataset> typedQuery = em.createQuery("SELECT OBJECT(o) FROM Dataset AS o WHERE MOD( o.id, :numPartitions) = :partitionId " +
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	109 skipClause +
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	110 "ORDER BY o.id", Dataset.class);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	111 typedQuery.setParameter("numPartitions", numPartitions);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	112 typedQuery.setParameter("partitionId", partitionId);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	113 return typedQuery.getResultList();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	114 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	115
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	116 public Dataset findByGlobalId(String globalId) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	117
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	118 String protocol = "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	119 String authority = "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	120 String identifier = "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	121 int index1 = globalId.indexOf(':');
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	122 String nonNullDefaultIfKeyNotFound = "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	123 String separator = settingsService.getValueForKey(SettingsServiceBean.Key.DoiSeparator, nonNullDefaultIfKeyNotFound);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	124 int index2 = globalId.indexOf(separator, index1 + 1);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	125 int index3 = 0;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	126 if (index1 == -1) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	127 throw new EJBException("Error parsing identifier: " + globalId + ". ':' not found in string");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	128 } else {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	129 protocol = globalId.substring(0, index1);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	130 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	131 if (index2 == -1 ) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	132 throw new EJBException("Error parsing identifier: " + globalId + ". Second separator not found in string");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	133 } else {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	134 if (index2 != -1) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	135 authority = globalId.substring(index1 + 1, index2);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	136 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	137 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	138 if (protocol.equals("doi")) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	139
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	140 index3 = globalId.indexOf(separator, index2 + 1);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	141 if (index3 == -1 ) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	142 identifier = globalId.substring(index2 + 1).toUpperCase();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	143 } else {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	144 if (index3 > -1) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	145 authority = globalId.substring(index1 + 1, index3);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	146 identifier = globalId.substring(index3 + 1).toUpperCase();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	147 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	148 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	149 } else {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	150 identifier = globalId.substring(index2 + 1).toUpperCase();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	151 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	152 String queryStr = "SELECT s from Dataset s where s.identifier = :identifier and s.protocol= :protocol and s.authority= :authority";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	153 Dataset foundDataset = null;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	154 try {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	155 Query query = em.createQuery(queryStr);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	156 query.setParameter("identifier", identifier);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	157 query.setParameter("protocol", protocol);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	158 query.setParameter("authority", authority);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	159 foundDataset = (Dataset) query.getSingleResult();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	160 } catch (javax.persistence.NoResultException e) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	161 logger.info("no ds found: " + globalId);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	162 // DO nothing, just return null.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	163 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	164 return foundDataset;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	165 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	166
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	167 public String generateIdentifierSequence(String protocol, String authority, String separator) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	168
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	169 String identifier = null;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	170 do {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	171 identifier = RandomStringUtils.randomAlphanumeric(6).toUpperCase();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	172 } while (!isUniqueIdentifier(identifier, protocol, authority, separator));
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	173
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	174 return identifier;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	175 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	176
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	177 /**
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	178 * Check that a identifier entered by the user is unique (not currently used
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	179 * for any other study in this Dataverse Network) alos check for duplicate
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	180 * in EZID if needed
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	181 */
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	182 public boolean isUniqueIdentifier(String userIdentifier, String protocol, String authority, String separator) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	183 String query = "SELECT d FROM Dataset d WHERE d.identifier = '" + userIdentifier + "'";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	184 query += " and d.protocol ='" + protocol + "'";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	185 query += " and d.authority = '" + authority + "'";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	186 boolean u = em.createQuery(query).getResultList().size() == 0;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	187 String nonNullDefaultIfKeyNotFound = "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	188 String doiProvider = settingsService.getValueForKey(SettingsServiceBean.Key.DoiProvider, nonNullDefaultIfKeyNotFound);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	189 if (doiProvider.equals("EZID")) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	190 if (!doiEZIdServiceBean.lookupMetadataFromIdentifier(protocol, authority, separator, userIdentifier).isEmpty()) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	191 u = false;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	192 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	193 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	194 return u;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	195 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	196
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	197 public String createCitationRIS(DatasetVersion version) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	198 return createCitationRIS(version, null);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	199 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	200
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	201 public String createCitationRIS(DatasetVersion version, FileMetadata fileMetadata) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	202 String publisher = version.getRootDataverseNameforCitation();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	203 List<DatasetAuthor> authorList = version.getDatasetAuthors();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	204 String retString = "Provider: " + publisher + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	205 retString += "Content: text/plain; charset=\"us-ascii\"" + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	206 // Using type "DBASE" - "Online Database", for consistency with
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	207 // EndNote (see the longer comment in the EndNote section below)>
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	208
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	209 retString += "TY - DBASE" + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	210 retString += "T1 - " + version.getTitle() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	211 for (DatasetAuthor author : authorList) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	212 retString += "AU - " + author.getName().getDisplayValue() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	213 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	214 retString += "DO - " + version.getDataset().getProtocol() + "/" + version.getDataset().getAuthority() + version.getDataset().getDoiSeparator() + version.getDataset().getIdentifier() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	215 retString += "PY - " + version.getVersionYear() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	216 retString += "UR - " + version.getDataset().getPersistentURL() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	217 retString += "PB - " + publisher + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	218
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	219 // a DataFile citation also includes filename und UNF, if applicable:
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	220 if (fileMetadata != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	221 retString += "C1 - " + fileMetadata.getLabel() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	222
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	223 if (fileMetadata.getDataFile().isTabularData()) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	224 if (fileMetadata.getDataFile().getUnf() != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	225 retString += "C2 - " + fileMetadata.getDataFile().getUnf() + "\r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	226 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	227 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	228 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	229
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	230 // closing element:
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	231 retString += "ER - \r\n";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	232
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	233 return retString;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	234 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	235
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	236 private XMLOutputFactory xmlOutputFactory = null;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	237
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	238 public String createCitationXML(DatasetVersion datasetVersion, FileMetadata fileMetadata) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	239 ByteArrayOutputStream outStream = new ByteArrayOutputStream();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	240 createEndNoteCitation(outStream, datasetVersion, fileMetadata);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	241 String xml = outStream.toString();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	242 return xml;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	243 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	244
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	245 public void createEndNoteCitation(OutputStream os, DatasetVersion datasetVersion, FileMetadata fileMetadata) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	246
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	247 xmlOutputFactory = javax.xml.stream.XMLOutputFactory.newInstance();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	248 XMLStreamWriter xmlw = null;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	249 try {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	250 xmlw = xmlOutputFactory.createXMLStreamWriter(os);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	251 xmlw.writeStartDocument();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	252 createEndNoteXML(xmlw, datasetVersion, fileMetadata);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	253 xmlw.writeEndDocument();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	254 } catch (XMLStreamException ex) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	255 Logger.getLogger("global").log(Level.SEVERE, null, ex);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	256 throw new EJBException("ERROR occurred during creating endnote xml.", ex);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	257 } finally {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	258 try {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	259 if (xmlw != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	260 xmlw.close();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	261 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	262 } catch (XMLStreamException ex) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	263 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	264 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	265 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	266
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	267 private void createEndNoteXML(XMLStreamWriter xmlw, DatasetVersion version, FileMetadata fileMetadata) throws XMLStreamException {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	268
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	269 String title = version.getTitle();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	270 String versionYear = version.getVersionYear();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	271 String publisher = version.getRootDataverseNameforCitation();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	272
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	273 List<DatasetAuthor> authorList = version.getDatasetAuthors();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	274
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	275 xmlw.writeStartElement("xml");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	276 xmlw.writeStartElement("records");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	277
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	278 xmlw.writeStartElement("record");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	279
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	280 // "Ref-type" indicates which of the (numerous!) available EndNote
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	281 // schemas this record will be interpreted as.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	282 // This is relatively important. Certain fields with generic
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	283 // names like "custom1" and "custom2" become very specific things
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	284 // in specific schemas; for example, custom1 shows as "legal notice"
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	285 // in "Journal Article" (ref-type 84), or as "year published" in
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	286 // "Government Document".
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	287 // We don't want the UNF to show as a "legal notice"!
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	288 // We have found a ref-type that works ok for our purposes -
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	289 // "Online Database" (type 45). In this one, the fields Custom1
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	290 // and Custom2 are not translated and just show as is.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	291 // And "Custom1" still beats "legal notice".
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	292 // -- L.A. 12.12.2014 beta 10
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	293
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	294 xmlw.writeStartElement("ref-type");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	295 xmlw.writeAttribute("name", "Online Database");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	296 xmlw.writeCharacters("45");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	297 xmlw.writeEndElement(); // ref-type
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	298
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	299 xmlw.writeStartElement("contributors");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	300 xmlw.writeStartElement("authors");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	301 for (DatasetAuthor author : authorList) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	302 xmlw.writeStartElement("author");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	303 xmlw.writeCharacters(author.getName().getDisplayValue());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	304 xmlw.writeEndElement(); // author
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	305 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	306 xmlw.writeEndElement(); // authors
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	307 xmlw.writeEndElement(); // contributors
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	308
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	309 xmlw.writeStartElement("titles");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	310 xmlw.writeStartElement("title");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	311 xmlw.writeCharacters(title);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	312 xmlw.writeEndElement(); // title
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	313
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	314 xmlw.writeEndElement(); // titles
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	315
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	316 xmlw.writeStartElement("section");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	317 String sectionString = "";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	318 if (version.getDataset().isReleased()) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	319 sectionString = new SimpleDateFormat("yyyy-MM-dd").format(version.getDataset().getPublicationDate());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	320 } else {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	321 sectionString = new SimpleDateFormat("yyyy-MM-dd").format(version.getLastUpdateTime());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	322 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	323
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	324 xmlw.writeCharacters(sectionString);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	325 xmlw.writeEndElement(); // publisher
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	326
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	327 xmlw.writeStartElement("dates");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	328 xmlw.writeStartElement("year");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	329 xmlw.writeCharacters(versionYear);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	330 xmlw.writeEndElement(); // year
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	331 xmlw.writeEndElement(); // dates
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	332
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	333 xmlw.writeStartElement("publisher");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	334 xmlw.writeCharacters(publisher);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	335 xmlw.writeEndElement(); // publisher
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	336
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	337 xmlw.writeStartElement("urls");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	338 xmlw.writeStartElement("related-urls");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	339 xmlw.writeStartElement("url");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	340 xmlw.writeCharacters(version.getDataset().getPersistentURL());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	341 xmlw.writeEndElement(); // url
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	342 xmlw.writeEndElement(); // related-urls
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	343 xmlw.writeEndElement(); // urls
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	344
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	345 // a DataFile citation also includes the filename and (for Tabular
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	346 // files) the UNF signature, that we put into the custom1 and custom2
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	347 // fields respectively:
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	348
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	349
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	350 if (fileMetadata != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	351 xmlw.writeStartElement("custom1");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	352 xmlw.writeCharacters(fileMetadata.getLabel());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	353 xmlw.writeEndElement(); // custom1
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	354
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	355 if (fileMetadata.getDataFile().isTabularData()) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	356 if (fileMetadata.getDataFile().getUnf() != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	357 xmlw.writeStartElement("custom2");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	358 xmlw.writeCharacters(fileMetadata.getDataFile().getUnf());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	359 xmlw.writeEndElement(); // custom2
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	360 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	361 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	362 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	363
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	364 xmlw.writeStartElement("electronic-resource-num");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	365 String electResourceNum = version.getDataset().getProtocol() + "/" + version.getDataset().getAuthority() + version.getDataset().getDoiSeparator() + version.getDataset().getIdentifier();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	366 xmlw.writeCharacters(electResourceNum);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	367 xmlw.writeEndElement();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	368 //<electronic-resource-num>10.3886/ICPSR03259.v1</electronic-resource-num>
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	369 xmlw.writeEndElement(); // record
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	370
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	371 xmlw.writeEndElement(); // records
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	372 xmlw.writeEndElement(); // xml
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	373
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	374 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	375
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	376 public DatasetVersionUser getDatasetVersionUser(DatasetVersion version, User user) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	377
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	378 DatasetVersionUser ddu = null;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	379 Query query = em.createQuery("select object(o) from DatasetVersionUser as o "
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	380 + "where o.datasetVersion.id =:versionId and o.authenticatedUser.id =:userId");
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	381 query.setParameter("versionId", version.getId());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	382 String identifier = user.getIdentifier();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	383 identifier = identifier.startsWith("@") ? identifier.substring(1) : identifier;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	384 AuthenticatedUser au = authentication.getAuthenticatedUser(identifier);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	385 query.setParameter("userId", au.getId());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	386 try {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	387 ddu = (DatasetVersionUser) query.getSingleResult();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	388 } catch (javax.persistence.NoResultException e) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	389 // DO nothing, just return null.
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	390 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	391 return ddu;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	392 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	393
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	394 public List<DatasetLock> getDatasetLocks() {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	395 String query = "SELECT sl FROM DatasetLock sl";
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	396 return (List<DatasetLock>) em.createQuery(query).getResultList();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	397 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	398
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	399 @TransactionAttribute(TransactionAttributeType.REQUIRES_NEW)
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	400 public void addDatasetLock(Long datasetId, Long userId, String info) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	401
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	402 Dataset dataset = em.find(Dataset.class, datasetId);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	403 DatasetLock lock = new DatasetLock();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	404 lock.setDataset(dataset);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	405 lock.setInfo(info);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	406 lock.setStartTime(new Date());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	407
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	408 if (userId != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	409 AuthenticatedUser user = em.find(AuthenticatedUser.class, userId);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	410 lock.setUser(user);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	411 if (user.getDatasetLocks() == null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	412 user.setDatasetLocks(new ArrayList());
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	413 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	414 user.getDatasetLocks().add(lock);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	415 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	416
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	417 dataset.setDatasetLock(lock);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	418 em.persist(lock);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	419 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	420
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	421 @TransactionAttribute(TransactionAttributeType.REQUIRES_NEW)
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	422 public void removeDatasetLock(Long datasetId) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	423 Dataset dataset = em.find(Dataset.class, datasetId);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	424 //em.refresh(dataset); (?)
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	425 DatasetLock lock = dataset.getDatasetLock();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	426 if (lock != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	427 AuthenticatedUser user = lock.getUser();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	428 dataset.setDatasetLock(null);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	429 user.getDatasetLocks().remove(lock);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	430 /*
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	431 * TODO - ?
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	432 * throw an exception if for whatever reason we can't remove the lock?
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	433 try {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	434 */
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	435 em.remove(lock);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	436 /*
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	437 } catch (TransactionRequiredException te) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	438 ...
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	439 } catch (IllegalArgumentException iae) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	440 ...
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	441 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	442 */
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	443 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	444 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	445
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	446
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	447 public boolean isDatasetCardImageAvailable(DatasetVersion datasetVersion, User user) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	448 if (datasetVersion == null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	449 return false;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	450 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	451
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	452 // First, check if this dataset has a designated thumbnail image:
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	453
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	454 if (datasetVersion.getDataset() != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	455 DataFile dataFile = datasetVersion.getDataset().getThumbnailFile();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	456 if (dataFile != null) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	457 return ImageThumbConverter.isThumbnailAvailable(dataFile, 48);
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	458 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	459 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	460
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	461 // If not, we'll try to use one of the files in this dataset version:
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	462 // (the first file with an available thumbnail, really)
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	463
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	464 List<FileMetadata> fileMetadatas = datasetVersion.getFileMetadatas();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	465
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	466 for (FileMetadata fileMetadata : fileMetadatas) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	467 DataFile dataFile = fileMetadata.getDataFile();
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	468
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	469 if (fileService.isThumbnailAvailable(dataFile, user)) {
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	470 return true;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	471 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	472
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	473 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	474
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	475 return false;
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	476 }
a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0 Zoe Hong <zhong@mpiwg-berlin.mpg.de> parents: diff changeset	477 }

10

a50cf11e5178 Rewrite LGDataverse completely upgrading to dataverse4.0