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0
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1 package de.mpiwg.itgroup.eSciDoc.utils;
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2 import java.io.ByteArrayInputStream;
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3 import java.io.File;
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4 import java.io.FilenameFilter;
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5 import java.io.IOException;
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6 import java.io.InputStream;
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7 import java.io.StringBufferInputStream;
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8 import java.io.StringWriter;
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9 import java.io.UnsupportedEncodingException;
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10 import java.io.Writer;
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11 import java.net.URL;
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12 import java.nio.ByteBuffer;
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13 import java.util.ArrayList;
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14 import java.util.HashMap;
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15 import java.util.Iterator;
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16 import java.util.List;
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17 import java.util.Set;
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18
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19
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20
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21 import org.w3c.dom.Attr;
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22
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23 import org.xml.sax.SAXException;
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24
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25 //import com.sun.org.apache.xml.internal.serialize.OutputFormat;
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26 //import com.sun.org.apache.xml.internal.serialize.XMLSerializer;
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27 import org.jdom.Attribute;
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28 import org.jdom.Document;
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29 import org.jdom.Element;
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30 import org.jdom.JDOMException;
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31 import org.jdom.Namespace;
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32 import org.jdom.input.DOMBuilder;
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33 import org.jdom.input.SAXBuilder;
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34 import org.jdom.output.XMLOutputter;
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35 import org.jdom.xpath.XPath;
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36
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37 import de.mpiwg.itgroup.eSciDoc.Tools.EScidocTools;
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38 import de.mpiwg.itgroup.eSciDoc.Tools.MyFileNameFilter;
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3
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39 import de.mpiwg.itgroup.eSciDoc.exceptions.ESciDocXmlObjectException;
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40
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41 public class eSciDocXmlObject {
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42
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43
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44 private Document dom;
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45 private XPath xpath;
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46 private String pid;
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47 private DOMBuilder parser;
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48
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3
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49 public eSciDocXmlObject(String pid, InputStream template) throws ESciDocXmlObjectException {
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50
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51 SAXBuilder builder = new SAXBuilder();
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52
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3
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53 try {
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54 dom = builder.build(template);
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55
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8
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56 if (pid!=null){
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57 xpath = EScidocTools.getESciDocXpath("//prop:pid");
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58
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8
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59 Element test = (Element) xpath.selectSingleNode(dom);
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3
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60
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8
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61 test.setText(pid);
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62 this.pid=pid;
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63 }
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3
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64 } catch (JDOMException e) {
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65 // TODO Auto-generated catch block
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66 e.printStackTrace();
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67 throw new ESciDocXmlObjectException();
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68 } catch (IOException e) {
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69 // TODO Auto-generated catch block
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70 e.printStackTrace();
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71 throw new ESciDocXmlObjectException();
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72 }
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73
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74 }
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75
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76 public eSciDocXmlObject(URL url) throws ESciDocXmlObjectException {
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77
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78 SAXBuilder builder = new SAXBuilder();
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79
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80 try {
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81 dom = builder.build(url);
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82
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83 xpath = EScidocTools.getESciDocXpath("//prop:pid");
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84
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85 Element test = (Element) xpath.selectSingleNode(dom);
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86
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87 this.pid= test.getTextTrim();
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88 } catch (JDOMException e) {
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89 // TODO Auto-generated catch block
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90 e.printStackTrace();
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91 throw new ESciDocXmlObjectException();
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92 } catch (IOException e) {
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93 // TODO Auto-generated catch block
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94 e.printStackTrace();
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95 throw new ESciDocXmlObjectException();
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96 }
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97
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98 }
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99
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100 public eSciDocXmlObject(Element el) throws ESciDocXmlObjectException {
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101
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102 try {
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103 dom = new Document((Element)el.clone());
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104
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105 xpath = EScidocTools.getESciDocXpath("//prop:pid");
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106
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107 Element test = (Element) xpath.selectSingleNode(dom);
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108 if (test!=null)
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109 this.pid= test.getTextTrim();
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110 } catch (JDOMException e) {
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111 // TODO Auto-generated catch block
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112 e.printStackTrace();
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113 throw new ESciDocXmlObjectException();
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114 }
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115 }
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116
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117 public eSciDocXmlObject(InputStream content) throws ESciDocXmlObjectException{
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118 SAXBuilder builder = new SAXBuilder();
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119
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120 try {
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121 dom = builder.build(content);
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122
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123 xpath = EScidocTools.getESciDocXpath("//prop:pid");
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124
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125 Element test = (Element) xpath.selectSingleNode(dom);
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126
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127 this.pid= test.getTextTrim();
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128 } catch (JDOMException e) {
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129 // TODO Auto-generated catch block
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130 e.printStackTrace();
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131 throw new ESciDocXmlObjectException();
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132 } catch (IOException e) {
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133 // TODO Auto-generated catch block
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134 e.printStackTrace();
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135 throw new ESciDocXmlObjectException();
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136 }
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2
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137
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138 }
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139
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140 public void insertDC(Element mdDc) throws Exception{
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141 //NodeList dcList = mdDc.getFirstChild().getChildNodes();
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142 XPath dcXPath = EScidocTools.getESciDocXpath("//dc-md"); //todo check path to dc in escddoc templates
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143
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144 Element dcContainer = (Element) dcXPath.selectSingleNode(dom);
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145
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146 if (dcContainer==null)
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147 throw new Exception();
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148
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149 for(Object ct: mdDc.getChildren())
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150 {
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151 if (Element.class.isInstance(ct)){
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152 Element e = (Element) ct;
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153 String name = e.getName();
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154 Element content = new Element(name, EScidocTools.DC);
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155 content.setText(e.getText());
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156 dcContainer.addContent(content);
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157 }
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158 }
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159 }
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160
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161 public void insertDC(HashMap<String,String> dc) throws Exception{
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162 Set<String> dcList = dc.keySet();
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163
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164 XPath dcXPath = EScidocTools.getESciDocXpath("//dc-md"); //todo check path to dc in escddoc templates
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165
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166 Element dcContainer = (Element) dcXPath.selectSingleNode(dom);
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167
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168 for (String name : dcList){
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169 Element newChild = new Element(name,EScidocTools.DC);
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170 newChild.setText(dc.get(name));
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171 dcContainer.addContent(newChild);
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172 }
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173
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174 }
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175
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176 public void insertMeta(Element meta) throws Exception{
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177 if (meta==null)
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178 return;
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179
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180 XPath xp = EScidocTools.getESciDocXpath("//metadata-records:md-record[@name='mpiwg-index_meta']");
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181 Element dcContainer = (Element) xp.selectSingleNode(dom);
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182
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183 dcContainer.addContent((Element)meta.clone());
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184
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185 }
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186
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187
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188 public void setTitle(String title) throws Exception{
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189 XPath xp = EScidocTools.getESciDocXpath("//foxml:xmlContent/oai_dc:dc");
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190 Element dcContainer = (Element) xp.selectSingleNode(dom);
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191
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192
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193
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194 Element newChild = new Element("title",EScidocTools.DC);
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195 newChild.setText(title);
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196
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197
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198 dcContainer.addContent(newChild);
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199
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200
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201
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202
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203 }
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204
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205 public void setReferenceFolder(String folderpath) throws Exception{
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206 XPath xp = EScidocTools.getESciDocXpath("//mpiwg:bundle/mpiwg:bundle-root/@path");
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207 Element container = (Element) xp.selectSingleNode(dom);
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208
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209 container.setText(folderpath);
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210
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211 }
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212
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213 public void setVLPId(String id) throws Exception{
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214 XPath xp = EScidocTools.getESciDocXpath("//vlp:admin/vlp:identifier");
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215 Element container = (Element) xp.selectSingleNode(dom);
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216
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217 container.setText(id);
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218 }
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219 /**
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220 * @param file Pfad mit den Grundordner des Dokument
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221 * @throws Exception
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222 */
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223 public void generateXMLIndex(File file) throws Exception{
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224
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225
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226 File[] files = file.listFiles();
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227
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228 //first try to find the image path
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229 File imagefolder = null;
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230 for (File f: files){
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231
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232 if (f.getName().equals("pageimg"))
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233 imagefolder = f;
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234 else if (f.getName().equals("pages"))
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235 imagefolder = f;
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236 }
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237 if (imagefolder==null)
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238 return;
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239
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240 FilenameFilter filter = new MyFileNameFilter();
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241
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242 ArrayList<ArrayList<String>> tupels = new ArrayList<ArrayList<String>>();
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243 ArrayList<String> tmp;
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244 for (File image : imagefolder.listFiles(filter))
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245 {
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246 tmp = new ArrayList<String>();
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247
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248 tmp.add(calculateName(image));
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249 tmp.add(image.getName());
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250
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251 tupels.add(tmp);
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252 }
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253 generateXMLIndex(tupels);
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254 }
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255
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256 private void generateXMLIndex(ArrayList<ArrayList<String>> tupels) throws Exception {
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257 // DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance();
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258 //factory.setNamespaceAware(true);
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259 //DocumentBuilder db =factory.newDocumentBuilder();
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260
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261 XPath xp = EScidocTools.getESciDocXpath("//vlp:index");
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262 Element index = (Element) xp.selectSingleNode(dom);
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263
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264
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265 for (ArrayList<String> tuple: tupels ){
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266
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267 Element newChild = new Element("page",EScidocTools.VLP);
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268 newChild.setText(tuple.get(0));
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269
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270 newChild.setAttribute("nr", tuple.get(1));
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271 index.addContent(newChild);
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272
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273 }
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274
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275
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276 }
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277
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278 private String calculateName(File f)
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279 {
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280 String name = f.getName();
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281 String[] splitted = name.split("[.]");
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282 String n = splitted[0];
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283 String name2 = n.substring(1);
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284 char letter = n.charAt(0);
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285 return letter+": "+name2;
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286 };
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287
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288
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289 public void setRelationship(String collection) throws Exception{
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290 XPath xp = EScidocTools.getESciDocXpath("//foxml:datastream[@ID='RELS-EXT']/foxml:datastreamVersion/foxml:xmlContent");
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291 Element xmlContent = (Element) xp.selectSingleNode(dom);
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292
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293
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294 XPath rdfxp = EScidocTools.getESciDocXpath("//rdf:RDF");
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295 Element rdf = (Element) rdfxp.selectSingleNode(dom);
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296
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297
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298 if (rdf==null)
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299 {
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300 rdf = new Element("RDF",EScidocTools.RDF);
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301
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302 xmlContent.addContent(rdf);
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303 }
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304
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305 rdf.setAttribute("rdf", EScidocTools.RDF);
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306 rdf.setAttribute("fedora", EScidocTools.FEDORA);
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307
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308 Element rdfDescription = new Element("Description",EScidocTools.RDF);
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309
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310 Namespace ns = Namespace.getNamespace("rdf",EScidocTools.RDF);
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311 rdfDescription.setAttribute("about","info:fedora/"+pid, ns);
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312
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313 Element rdfMember = new Element("isMemberOfCollection",EScidocTools.FEDORA);
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314 rdfDescription.setAttribute("resource", collection, ns);
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315
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316 rdfDescription.addContent(rdfMember);
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317
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318 rdf.addContent(rdfDescription);
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319
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320
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321
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322
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323 }
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324 public void addWebUrl(String url) throws Exception
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325 {
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326 XPath xp = EScidocTools.getESciDocXpath("//escidocComponents:content[@xlink:title='web_page']");
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327 Element xmlContent = (Element) xp.selectSingleNode(dom);
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328
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329
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330 Namespace ns = Namespace.getNamespace("xlink",EScidocTools.xlink);
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331
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332 xmlContent.setAttribute("href", url,ns);
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333 }
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334
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335 public void addOrigUrlToMPIWGMetaData(String url) throws Exception
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336 {
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337 XPath xp = EScidocTools.getESciDocXpath("//mpiwg:admin/mpiwg:orig-ref");
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338 Element xmlContent = (Element) xp.selectSingleNode(dom);
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339
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340
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341 Namespace ns = Namespace.getNamespace("xlink",EScidocTools.xlink);
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342
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343 xmlContent.setAttribute("href", url,ns);
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344
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345 }
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346
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347 public void addIndexMetaUrl(String url) throws Exception
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348 {
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349 if (url.equals(""))
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350 return;
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351
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352 InputStream componentXML=getClass().getResourceAsStream("/de/mpiwg/itgroup/eSciDoc/xmlTemplates/component.xml");
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353 addComponent(url,componentXML,"index_meta","text/xml","internal-managed");
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354
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355
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356 }
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357
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358
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359
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3
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360 /**
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361 * @return Object in eScidoc XML formatting
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362 * @throws IOException
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363 */
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0
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364 public String printXML() throws IOException{
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365 XMLOutputter out = new XMLOutputter();
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366
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367 String string = out.outputString(dom);
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368 return string;
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369
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370 }
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371
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372 public void addFullText(String url) throws Exception {
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373 addFullText(url,getClass().getResourceAsStream("/de/mpiwg/itgroup/eSciDoc/xmlTemplates/component.xml"));
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374
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375 }
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376
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377 public void addFullText(String url, InputStream inputStream) throws Exception {
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378 addComponent(url, inputStream,"text","text/xml","internal-managed");
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379 }
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380
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381
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382 public void addComponent(String url, InputStream inputStream, String category, String mimeType, String storageType) throws JDOMException, IOException{
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383
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384 SAXBuilder builder = new SAXBuilder();
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385
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386 Document dom2 = builder.build(inputStream);
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387
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388
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389 XPath xp = EScidocTools.getESciDocXpath("//escidocComponents:properties/prop:content-category");
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390 Element item = (Element)xp.selectSingleNode(dom2);
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391 item.setText(category);
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392
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393 xp = EScidocTools.getESciDocXpath("//escidocComponents:properties/prop:mime-type");
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394 item = (Element)xp.selectSingleNode(dom2);
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395 item.setText(mimeType);
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396
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397 xp = EScidocTools.getESciDocXpath("//escidocComponents:content");
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398 item = (Element)xp.selectSingleNode(dom2);
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399
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400 Namespace ns = Namespace.getNamespace("xlink",EScidocTools.xlink);
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401
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402 item.setAttribute("href", url,ns);
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403 item.setAttribute("storage",storageType);
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404
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405
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406 xp = EScidocTools.getESciDocXpath("//escidocComponents:components");
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407 item = (Element)xp.selectSingleNode(dom);
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408
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409
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410 //Node newNode = dom.importNode(dom2.getFirstChild(), true);
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411 item.addContent((Element)dom2.getRootElement().clone());
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412 }
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413
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414 public void addImageFolderPath(String imageFolder) throws Exception {
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415
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416 XPath xp = EScidocTools.getESciDocXpath("//mpiwg:admin");
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417 Element item = (Element)xp.selectSingleNode(dom);
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418
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419 Element images= new Element("imageFolder",EScidocTools.MPIWG);
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420 images.setText(imageFolder);
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421
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422 item.addContent(images);
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423
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424
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425 }
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426
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427 public void addArchiveFolderPath(String archivePath) throws JDOMException {
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428 XPath xp = EScidocTools.getESciDocXpath("//mpiwg:admin");
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429 Element item = (Element)xp.selectSingleNode(dom);
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430
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431 Element images= new Element("archivePath",EScidocTools.MPIWG);
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432 images.setText(archivePath);
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433
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434 item.addContent(images);
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435
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436 }
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437
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438 public Boolean upDateFromXML(String xml) {
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439 SAXBuilder builder = new SAXBuilder();
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440
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441
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442 ByteArrayInputStream in;
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443 try {
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444 in = new ByteArrayInputStream(xml.getBytes("utf-8"));
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445
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446 dom = builder.build(in);
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447
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448 } catch (UnsupportedEncodingException e) {
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449 // TODO Auto-generated catch block
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450 e.printStackTrace();
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451 return false;
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452 } catch (JDOMException e) {
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453 // TODO Auto-generated catch block
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454 e.printStackTrace();
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455 return false;
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456 } catch (IOException e) {
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457 // TODO Auto-generated catch block
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458 e.printStackTrace();
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459 return false;
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460 }
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461
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462 return true;
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463
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464
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465
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466 }
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467
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468 public void addDisplayUrl(String link) throws JDOMException, IOException {
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469
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470 if (link==null || link.equals(""))
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471 return;
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472
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473 InputStream componentXML=getClass().getResourceAsStream("/de/mpiwg/itgroup/eSciDoc/xmlTemplates/component.xml");
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474 addComponent(link,componentXML,"display_url","text/html","external-url");
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475
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476
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|
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477
|
|
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478
|
|
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479
|
|
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480 }
|
|
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481
|
|
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482 public String getESciDocId() throws JDOMException {
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|
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483
|
|
|
484 Element el = dom.getRootElement();
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|
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485
|
|
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486 XPath xp = EScidocTools.getESciDocXpath("./@xlink:href");
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487 Attribute href = (Attribute) xp.selectSingleNode(el);
|
|
8
|
488
|
|
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489
|
|
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490 return href.getValue();
|
|
|
491
|
|
|
492 }
|
|
|
493
|
|
|
494 public String getESciDocObjId() throws JDOMException {
|
|
|
495
|
|
|
496 Element el = dom.getRootElement();
|
|
|
497
|
|
|
498 XPath xp = EScidocTools.getESciDocXpath("./@objid");
|
|
|
499 Attribute href = (Attribute) xp.selectSingleNode(el);
|
|
|
500
|
|
|
501
|
|
|
502 return href.getValue();
|
|
|
503
|
|
0
|
504 }
|
|
|
505
|
|
|
506 public void setContentModel(String href) throws JDOMException {
|
|
|
507
|
|
|
508 XPath xp = EScidocTools.getESciDocXpath("//escidocItem:properties/srel:content-model/@xlink:href");
|
|
|
509 Attribute item = (Attribute)xp.selectSingleNode(dom);
|
|
|
510 item.setValue(href);
|
|
|
511
|
|
|
512
|
|
|
513 }
|
|
|
514
|
|
|
515 public void setContext(String context) throws JDOMException {
|
|
|
516 XPath xp = EScidocTools.getESciDocXpath("//escidocItem:properties/srel:context/@xlink:href");
|
|
|
517 Attribute item = (Attribute)xp.selectSingleNode(dom);
|
|
|
518 item.setValue(context);
|
|
|
519
|
|
|
520
|
|
|
521 }
|
|
|
522
|
|
|
523 public Document getDocument(){
|
|
|
524 return dom;
|
|
|
525 }
|
|
|
526
|
|
3
|
527 public void setLastModificationDate(String lastModificationDateOld) throws ESciDocXmlObjectException {
|
|
|
528 Attribute item;
|
|
|
529 try {
|
|
|
530 XPath xp = EScidocTools.getESciDocXpath(".//escidocItem:item/@last-modification-date");
|
|
|
531 item = (Attribute)xp.selectSingleNode(dom);
|
|
8
|
532 if (item==null){
|
|
|
533 xp = EScidocTools.getESciDocXpath(".//escidocItem:item");
|
|
|
534 Element element = (Element)xp.selectSingleNode(dom);
|
|
|
535 element.setAttribute("last-modification-date", lastModificationDateOld);
|
|
|
536 }
|
|
|
537 else {
|
|
|
538 item.setValue(lastModificationDateOld);
|
|
|
539 }
|
|
3
|
540
|
|
|
541 } catch (JDOMException e) {
|
|
|
542 e.printStackTrace();
|
|
|
543 throw new ESciDocXmlObjectException();
|
|
|
544 }
|
|
8
|
545
|
|
|
546
|
|
3
|
547
|
|
|
548
|
|
|
549 }
|
|
|
550
|
|
0
|
551
|
|
|
552 }
|
